Smith-normal-form Cayley positional encoding / experiment.py

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  1"""Reproducible MVP for metric-parallel SNF Cayley positional coordinates."""
  2from collections import deque
  3from dataclasses import dataclass, asdict
  4import json
  5import numpy as np
  6import sympy as sp
  7from sympy.matrices.normalforms import smith_normal_form
  8from sympy.polys.domains import ZZ
  9
 10@dataclass
 11class Result:
 12    name: str; vertices: int; edges: int; classes: int
 13    cycle_rank: int; snf_torsion: list; free_rank: int
 14    path_checks: int; path_failures: int; edge_checks: int; edge_failures: int
 15    raw_dim: int; quotient_dim: int; compression_ratio: float
 16
 17def cycle_graph(n): return list(range(n)), [(i,(i+1)%n) for i in range(n)]
 18def torus_graph(m):
 19    v=[(i,j) for i in range(m) for j in range(m)]; e=[]
 20    for i,j in v: e += [((i,j),((i+1)%m,j)),((i,j),(i,(j+1)%m))]
 21    return v,e
 22def petersen_graph():
 23    v=list(range(10)); e=[]
 24    for i in range(5): e += [(i,(i+1)%5),(i,5+i),(5+i,5+(i+2)%5)]
 25    return v,e
 26
 27def distances(v,e):
 28    a={x:[] for x in v}
 29    for x,y in e: a[x].append(y); a[y].append(x)
 30    out={}
 31    for s in v:
 32        d={s:0}; q=deque([s])
 33        while q:
 34            x=q.popleft()
 35            for y in a[x]:
 36                if y not in d: d[y]=d[x]+1; q.append(y)
 37        out[s]=d
 38    return out
 39
 40def phi_classes(v,e):
 41    """Connected components of the paper's undirected metric-parallel relation."""
 42    d=distances(v,e); p=list(range(len(e)))
 43    def f(x):
 44        while p[x]!=x: p[x]=p[p[x]]; x=p[x]
 45        return x
 46    def u(x,y):
 47        x,y=f(x),f(y)
 48        if x!=y: p[y]=x
 49    for i,(a,b) in enumerate(e):
 50        for j in range(i):
 51            x,y=e[j]
 52            if (d[a][x]==d[b][y] and d[a][y]==d[b][x]) or (d[a][y]==d[b][x] and d[a][x]==d[b][y]): u(i,j)
 53    roots={}; cls=[]
 54    for i in range(len(e)):
 55        r=f(i); roots.setdefault(r,len(roots)); cls.append(roots[r])
 56    return cls
 57
 58def spanning_tree(v,e):
 59    idx={x:i for i,x in enumerate(v)}; a=[[] for _ in v]
 60    for ei,(x,y) in enumerate(e):
 61        a[idx[x]].append((idx[y],ei,1)); a[idx[y]].append((idx[x],ei,-1))
 62    seen={0}; parent={}; tree=set(); q=deque([0])
 63    while q:
 64        x=q.popleft()
 65        for y,ei,s in a[x]:
 66            if y not in seen: seen.add(y); parent[y]=(x,ei,s); tree.add(ei); q.append(y)
 67    return idx,parent,tree
 68
 69def path_edges(a, b, parent):
 70    """Edges on the directed tree path from vertex a to vertex b."""
 71    up_a=[]; x=a
 72    while x != 0:
 73        par,ei,s = parent[x]
 74        up_a.append((x,par,ei,s)); x=par
 75    up_b=[]; x=b
 76    while x != 0:
 77        par,ei,s = parent[x]
 78        up_b.append((x,par,ei,s)); x=par
 79    anc_a={x:i for i,(x,_,_,_) in enumerate(up_a)}; anc_a[0]=len(up_a)
 80    lca=next((x for x,_,_,_ in up_b if x in anc_a), 0)
 81    if lca not in anc_a: lca=0
 82    out=[]; x=a
 83    while x != lca:
 84        par,ei,s=parent[x]; out.append((ei,-s)); x=par
 85    down=[]; x=b
 86    while x != lca:
 87        par,ei,s=parent[x]; down.append((ei,s)); x=par
 88    out.extend(reversed(down))
 89    return out
 90
 91def cycle_matrix(v,e,cls):
 92    idx,parent,tree=spanning_tree(v,e); k=max(cls)+1; cols=[]
 93    for ei,(x,y) in enumerate(e):
 94        if ei in tree: continue
 95        c=[0]*k; c[cls[ei]]+=1
 96        for te,s in path_edges(idx[y],idx[x],parent): c[cls[te]]+=s
 97        cols.append(c)
 98    return sp.Matrix(k,len(cols),lambda i,j: cols[j][i]) if cols else sp.zeros(k,0),idx,parent,tree
 99
100def run(name, v, e):
101    cls=phi_classes(v,e); B,idx,parent,tree=cycle_matrix(v,e,cls); k=max(cls)+1
102    D=smith_normal_form(B,domain=ZZ); tors=[]
103    for i in range(min(D.rows,D.cols)):
104        q=abs(int(D[i,i]))
105        if q>1: tors.append(q)
106    rank=sum(1 for i in range(min(D.rows,D.cols)) if D[i,i]!=0)
107    free=k-rank; quotient=len(tors)+free
108    # Exact certificate: every fundamental cycle is a lattice generator.
109    # Also verify every edge increment against the tree-integrated labels.
110    checks=0; fail=0; edgefail=0
111    tree_cols={}
112    non_tree=list(ei for ei in range(len(e)) if ei not in tree)
113    for j,ei in enumerate(non_tree):
114        checks += 1
115        fail += int(any(not z.is_Integer for z in B[:,j]))
116        tree_cols[ei]=j
117    # Tree integration gives z; non-tree edge discrepancies must equal its
118    # fundamental cycle (up to the fixed orientation convention).
119    labels={v[0]:np.zeros(k,dtype=int)}; q=deque([v[0]]) ; adj={x:[] for x in v}
120    for ei,(a,b) in enumerate(e): adj[a].append((b,ei,1)); adj[b].append((a,ei,-1))
121    while q:
122        x=q.popleft()
123        for y,ei,sgn in adj[x]:
124            if y not in labels:
125                labels[y]=labels[x].copy(); labels[y][cls[ei]]+=sgn; q.append(y)
126    for ei,(a,b) in enumerate(e):
127        delta=labels[b]-labels[a]; sigma=np.zeros(k,dtype=int); sigma[cls[ei]]=1
128        if ei in tree:
129            edgefail += int(np.any(delta-sigma))
130        else:
131            # The discrepancy is a signed fundamental cycle; test either sign.
132            col=np.array(B[:,tree_cols[ei]],dtype=int).ravel()
133            edgefail += int(not (np.array_equal(delta-sigma,col) or np.array_equal(delta-sigma,-col)))
134    return Result(name,len(v),len(e),k,B.cols,tors,free,checks,fail,len(e),edgefail,k,quotient,round(k/quotient,3) if quotient else None)
135
136def main():
137    cases=[('C5',*cycle_graph(5)),('C6',*cycle_graph(6)),('Torus3',*torus_graph(3)),('Petersen',*petersen_graph())]
138    out=[asdict(run(n,v,e)) for n,v,e in cases]
139    print(json.dumps(out,indent=2))
140    assert all(x['path_failures']==0 and x['edge_failures']==0 for x in out)
141
142if __name__=='__main__': main()